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Table 4 Gene-finding performance for D. melanogaster genes with D. pseudoobscura EST evidence.

From: Reranking candidate gene models with cross-species comparison for improved gene prediction

 

Gene

Transcript

Exon

     

ALL

initial

internal

terminal

single

 

sn%

sp%

sn%

sp%

sn%

sp%

sn%

sp%

sn%

sp%

sn%

sp%

sn%

sp%

Evigan-5g

71.0

74.6

59.2

74.64

78.1

88.9

72.0

86.3

81.8

90.0

77.9

90.0

81.4

89.2

ReRanker-5g

75.6

79.4

63.2

79.4

79.4

91.2

74.0

88.8

82.5

92.7

79.8

91.8

81.8

89.6

  1. Performance on the 1191 D. melanogaster loci whose putative orthologs on D. pseudoobscura are supported by EST sequences (see text for details). Note that ReRanker-5g improves on Evigan-5g across the board (improvement indicated by bold).