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Figure 3 | BMC Bioinformatics

Figure 3

From: Structural assembly of two-domain proteins by rigid-body docking

Figure 3

The overall success rate of pyDock and pyDockTET. (a) The success rate of pyDock and pyDockTET for identifying acceptable solutions (RMSD = 10 Å) in the top N solutions (N = 10, 20, 30, 40, 50, 100, 200, 300, 400, 500) for the non-redundant domain-domain set. (b) Success rates for identifying acceptable solutions when considering only those cases with at least one acceptable solution within the ZDOCK docking set. (c) Success rates for identifying good solutions (RMSD ≤ 5 Å), considering only those cases with at least one good solution within the ZDOCK docking set. (d) Success rates for identifying acceptable solutions considering only those cases that had acceptable but not good solutions. In the four panels, the results of pyDockTET are shown with solid lines and the results of pyDock are shown with dashed lines with circle markers. The random predictive rates are shown with dotted lines with diamond marker.

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