From: Structural assembly of two-domain proteins by rigid-body docking
linker length | domain-domain PDBa | docking from cryst.b | Docking from modelsc | ||
---|---|---|---|---|---|
 |  | pyDock | pyDockTET | pyDock | pyDockTET |
2 | 1b8p_A_158_159 | 1 (1.3) | 1 (6.8) | 6 (4.5) | 6 (4.5) |
4 | 1ar4_A_84_87 | 68 (2.2) | 39 (2.2) | 15 (5.5) | 2 (5.5) |
 | 1aw7_A_93_96 | 1 (2.2) | 1 (2.2) | 1 (3.2) | 1 (3.2) |
 | 1ffu_F_176_179 | 1 (1.9) | 1 (1.9) | 98 (9.6) | 121 (9.6) |
5 | 1b06_A_93_97 | 11 (3.9) | 1 (3.9) | 3 (4.2) | 2 (7.5) |
6 | 1dlu_B_263_268 | 1 (1.8) | 1 (1.8) | 1 (5.1) | 1 (9.2) |
7 | 1ca1_-_251_257 | 301 (4.8) | 10 (4.8) | 415 (7.7) | 22 (7.8) |
 | 1e5m_A_251_257 | 1 (1.3) | 1 (1.3) | 1 (3.6) | 1 (3.6) |
 | 1gk8_C_147_153 | - | - | - | - |
8 | 1j3n_A_244_251 | 1 (1.9) | 1 (5.6) | 1 (2.0) | 1 (5.2) |
9 | 1ee0_A_234_242 | 4 (8.1) | 2 (8.1) | 1 (2.9) | 1 (2.9) |
 | 1nez_A_180_188 | - | - | 803 (9.1) | 101 (9.1) |
 | 1s9v_B_88_96 | - | - | - | - |
11 | 1etp_B_90_100 | 809 (7.4) | 204 (7.4) | 1303 (9.8) | 437 (9.8) |
12 | 1onq_A_182_193 | - | - | - | - |
13 | 1edh_B_100_112 | - | - | - | - |
14 | 1hnf_-_97_110 | - | - | - | - |
 | 1mb8_A_173_186 | - | - | 1 (7.2) | 1 (7.2) |
15 | 1jk8_B_88_102 | - | - | - | - |
16 | 1k2d_B_87_102 | - | - | - | - |