Table 2 AUC obtained in the PEP dataset.
From: A genetic approach for building different alphabets for peptide and protein classification
PEP (AUC) | N = 1, S = 20 | N = 2, S = 20 | N = 2, S = 8 | N = 1, S = 8 | N = 2, S = 4 | N = 1, S = 4 | FUS1 | FUS2 |
|---|---|---|---|---|---|---|---|---|
Baseline | 0.855 | 0.887 | 0.795 | 0.830 | 0.906 | 0.890 | 0.908 | 0.890 |
GA(5) H | " | " | 0.914 | 0.842 | 0.897 | 0.782 | 0.916 | 0.910 |
GA(1) P | " | " | 0.859 | 0.855 | 0.914 | 0.823 | 0.930 | 0.919 |
GA(5) P | " | " | 0.938 | 0.836 | 0.940 | 0.846 | 0.924 | 0.949 |
GA(15) P | " | " | 0.925 | 0.891 | 0.937 | 0.841 | 0.933 | 0.924 |
GA(5) HP | " | " | 0.928 | 0.785 | 0.844 | 0.812 | 0.934 | 0.944 |
GA*(5) P | " | " | 0.945 | 0.865 | 0.951 | 0.871 | 0.911 | 0.917 |