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Table 4 List of protein sequences from nr database which contain C-MT domains adjacent to the core NRPS domains

From: In silico analysis of methyltransferase domains involved in biosynthesis of secondary metabolites

Gi. no. Domains Identity (%) Template Organism name
108809363 ACP-C-A-CMT-ACP-C 25 yersi01_CM_002 Yersinia pestis Antiqua
108809365 C-A-CMT 33 nodul02_CM_001 Yersinia pestis Antiqua
108813376 C-A-CMT 33 nodul02_CM_001 Yersinia pestis Nepal516
116215693 CMT-ACP-C-A-ACP-TE 47 yersi01_CM_002 Vibrio cholerae RC385
148271509 C-A-CMT-ACP 33 nodul02_CM_001 Clavibacter michiganensis subsp.michiganensis
153947007 C-A-CMT 33 nodul02_CM_001 Yersinia pseudotuberculosis IP 31758
153954130 ACP-C-A-CMT-ACP-C-ACP 29 nodul02_CM_001 Clostridium kluyveri DSM 555
16121089 C-A-CMT 33 nodul02_CM_001 Yersinia pestis CO92
16121091 ACP-C-A-CMT-ACP-C 25 yersi01_CM_002 Yersinia pestis CO92
17546530 C-A-CMT-ACP-TE 33 leina01_CM_001 Ralstonia solanacearum GMI1000
21225943 C-A-CMT-ACP 33 nodul02_CM_001 Streptomyces coelicolor A3(2)
22127285 ACP-C-A-CMT-ACP-C 25 yersi01_CM_002 Yersinia pestis KIM
26248281 ACP-C-CMT-ACP-TE 100 yersi01_CM_002 Escherichia coli CFT073
28869792 ACP-C-A-CMT-ACP-C-ACP 27 leina01_CM_001 Pseudomonas syringae pv. tomato str. DC3000
41409840 C-A-CMT 34 yersi01_CM_002 M. avium subsp. paratuberculosis K-10
45443170 C-A-CMT 33 nodul02_CM_001 Yersinia pestis biovar Microtus str. 91001
51597596 C-A-CMT 33 nodul02_CM_001 Yersinia pseudotuberculosis IP 32953
89102588 ACP-C-A-CMT-ACP-C 25 yersi01_CM_002 Yersinia pestis biovar Orientalis str. IP275
89895567 C-A-CMT 37 yersi01_CM_002 Desulfitobacterium hafniense Y51
90424526 C-A-CMT-ACP-TE 38 yersi01_CM_002 Rhodopseudomonas palustris BisB18
  1. List of protein sequences from nr database which contain C-MT domains adjacent to the core NRPS domains as identified by our MT HMM profile search. Gene identifier number, domain organization and organism name is listed in columns 1, 2 and 5. Columns 4 and 3 list the closest match (as identified by pair BLAST) with the representative MT domains from experimentally characterized NRPS/PKS clusters and the corresponding percentage identities.