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Table 5 List of representative protein sequences from nr database which contain MT domains in combination with other functional domains

From: In silico analysis of methyltransferase domains involved in biosynthesis of secondary metabolites

Gi no.

Domains

No. of proteins

Organism name

113477217

Glycos_transf_1-OMT-Glycos_transf_2

19

Trichodesmium erythraeum IMS101

110599935

TPR_1-TPR_2-TPR_1-TPR_2-TPR_2-TPR_1-TPR_2-OMT

18

Geobacter sp. FRC-32

154319269

KS-KS-AT-CMT-ER-DH-KR-Carn_acyltransf

7

Botryotinia fuckeliana B05.10

126178605

OMT-Dala_Dala_lig_C

4

Methanoculleus marisnigri JR1

110634799

Abhydrolase_1-OMT

3

Mesorhizobium sp. BNC1

31794901

Radical_SAM-OMT

3

Mycobacterium bovis AF2122/97

30681189

DUF248-OMT

2

Arabidopsis thaliana

62290714

HTH_3-OMT

2

Brucella abortus biovar 1 str. 9–941

71013608

Amidohydro_3-OMT

2

Ustilago maydis 521

107099798

FA_hydroxylase-OMT

2

Pseudomonas aeruginosa PACS2

147791135

Amino_oxidase-OMT

2

Pseudomonas aeruginosa PACS2

156064387

E1-E2_ATPase-OMT

2

Sclerotinia sclerotiorum 1980

157382467

A-ACP-C-A-NMT-ACP-ACP-C-ApbA-ApbA_C

1

Xylaria sp. BCC 1067

157752876

OMT-Nol1_Nop2_Fmu

1

Caenorhabditis briggsae

153813751

AstE_AspA-OMT

1

Ruminococcus obeum ATCC 29174

71030506

OMT-Pox_MCEL

1

Theileria parva strain Muguga

66825109

KS-KS-AT-CMT-DH-KR-Chal_sti_synt_N-Chal_sti_synt_C

1

Dictyostelium discoideum AX4

145608084

HET-OMT

1

Magnaporthe grisea 70-15

147858936

DUF642-OMT

1

Vitis vinifera

158520366

DUF1365-OMT

1

Desulfococcus oleovorans Hxd3

115402313

OMT-MIP

1

Aspergillus terreus NIH2624

110681402

C-A-NMT-ACP-C-A-ACP-TE-PEP-utilizers

1

Chondromyces crocatus

17546523

OMT-TE-ACPS

1

Ralstonia solanacearum GMI1000

51892502

Phosphodiest-OMT

1

Symbiobacterium thermophilum IAM 14863

116207616

MFS_1-KS-KS-AT-CMT-DH-ER-KR-DH

1

Chaetomium globosum CBS 148.51

41407518

C-A-Strep_SA_rep-ACP-C-A-NMT-ACP-C-A-Strep_SA_rep-ACP-C-A-Strep_SA_rep-ACP-C-A-Strep_SA_rep-ACP-TE

2

Mycobacterium avium subsp.

paratuberculosis K-10

26541536

ACP-KR-DH-KS-KS-ACP-ACP-KS-KS-KR-DH-ACP-CMT-ACP-KS-KS-DH-KR-ACP-KS-KS-ACP-ACP-Beta_elim_lyase-Abhydrolase_1

1

Streptomyces atroolivaceus

108757966

A-ACP-C-A-NMT-ACP-C-A-ACP-C-A-ACP-C-A-ACP-C-A-ACP-KS-KS-AT-ACP-C-Bac_luciferase-C-A-ACP-C-A-ACP-C-A-ACP-C-A-ACP-C-A-ACP-TE

1

Myxococcus xanthus DK 1622

  1. List of representative protein sequences from nr database which contain C-MT, N-MT or O-MT domains in combination with functional domains other than core PKS or NRPS domains. Gene identifier number, domain organization and organism names are listed in columns 1, 2 and 4 respectively, while column 3 lists total number of proteins having similar domain organization.