Table 1 File extensions for CoCoNUT output and their semantics
From: CoCoNUT: an efficient system for the comparison and analysis of genomes
extension | file contents |
|---|---|
.chn | chains |
.ccn | chain boundaries without fragments |
.stc | statistics about the fragments and the chains |
.align | alignment of the chains on a character level |
.filtered | filtered chains |
.ps | 2D plots of the results in PostScript format |