J48 | Naïve Bayes | SMO | |
---|---|---|---|
a) Sequences folding to the top 10% of designable structures vs. sequences folding to the bottom 10% of designable structures for both shapes | 69.5% correct | 65.0% correct | 65.6% correct |
AUC 0.73 | AUC 0.69 | AUC 0.67 | |
Sens: 0.67 | Sens: 0.66 | Sens: 0.71 | |
Spec: 0.71 | Spec: 0.65 | Spec: 0.64 | |
b) Sequences folding to the top 10% of designable structures of hexagonal shape vs. sequences folding to the bottom 10% of designable structures in the triangular shape | 98.1% correct | 84.9% correct | 87.0% correct |
AUC 0.99 | AUC 0.92 | AUC 0.87 | |
Sens: 0.98 | Sens: 0.82 | Sens: 0.84 | |
Spec: 0.98 | Spec: 0.90 | Spec: 0.92 | |
c) Sequences folding to the top 10% of designable structures of triangular shape vs. sequences folding to the bottom 10% of designable structures in the hexagonal shape | 98.0% correct | 65.8% correct | 64.3% correct |
AUC 0.99 | AUC 0.70 | AUC 0.63 | |
Sens: 0.98 | Sens: 0.64 | Sens: 0.75 | |
Spec: 0.98 | Spec: 0.72 | Spec: 0.66 |