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Table 3 High SGPC pairs, lung

From: Identifying differential correlation in gene/pathway combinations

Affy HGU95 ID Gene symbol KEGG ID Pathway description S GPC p
38835_at TM9SF1 00900 Terpenoid biosynthesis 0.621 5e-04
41129_at TMEM41B 00900 Terpenoid biosynthesis 0.603 0.0017
39405_at UTP14C 00900 Terpenoid biosynthesis 0.58 0.0015
32150_at GOLGA4 00900 Terpenoid biosynthesis 0.558 0.0049
1394_at RHOA 00900 Terpenoid biosynthesis 0.534 0.0039
326_i_at RPS20* 03010 Ribosome 0.507 0.0015
39009_at LSM3 03050 Proteasome 0.484 0.0053
37748_at KIAA0232 00900 Terpenoid biosynthesis 0.477 0.0022
33859_at SAP18 00900 Terpenoid biosynthesis 0.463 0.0072
31853_at EED 03050 Proteasome 0.462 0.0105
38668_at GPATCH8 00900 Terpenoid biosynthesis 0.461 0.0064
40140_at RNF103 00900 Terpenoid biosynthesis 0.456 0.0077
34326_at COPB1 00900 Terpenoid biosynthesis 0.45 0.0083
33880_at ACSL3 00900 Terpenoid biosynthesis 0.441 0.0119
40623_at UBE3B 00900 Terpenoid biosynthesis 0.422 0.0093
33423_g_at SEC13 03050 Proteasome 0.411 0.0089
37891_at YIPF6 00900 Terpenoid biosynthesis 0.408 0.0105
41159_at CLTC 00900 Terpenoid biosynthesis 0.408 0.0193
35845_at SEC24B 00900 Terpenoid biosynthesis 0.405 0.0179
32051_at ALG8 00900 Terpenoid biosynthesis 0.397 0.0139
39336_at ARF3 00900 Terpenoid biosynthesis 0.385 0.0131
40115_at ATP5C1 03050 Proteasome 0.384 0.0138
38811_at ATIC 03050 Proteasome 0.378 0.0188
40411_at NCOA6 00900 Terpenoid biosynthesis 0.377 0.0117
1985_s_at NME1 03050 Proteasome 0.369 0.0073
35760_at ATP5H 03050 Proteasome 0.356 0.0178
35290_at YTHDF3 00900 Terpenoid biosynthesis 0.348 0.0033
40605_at SNX4 00900 Terpenoid biosynthesis 0.348 0.0163
  1. High-ranking gene-pathway pairs in lung data, sorted by descending SGPC. Affymetrix ID, gene symbol, KEGG pathway ID, and pathway description are given, along with the GPC-scores; p values are based on a permutation test with 104 resamplings. *The 326_i_at-Ribosome pair was included in the analysis due to the absence of annotation data for 326_i_at, but is correcly identified by the analysis as related; see the Results section.
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