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Table 2 Orthologous conservation of target TFBS in target genes

From: CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

A       
Gene Name GeneID TF Name Tot. Score Score #Promos Length
Chrng ENSMUSG00000026253 MYOGENIN_Q6 1 1000 5 10
Chrng ENSMUSG00000026253 MYOGENIN_Q6 1 1000 5 10
Tnnt3 ENSMUSG00000061723 MYOGENIN_Q6 1 1000 2 10
Tnnc2 ENSMUSG00000017300 MYOGENIN_Q6 1 800 2 8
Tnni1 ENSMUSG00000026418 MYOGENIN_Q6 1 800 2 8
Myog ENSMUSG00000026459 MYOGENIN_Q6 0.83 666.7 5 8
Acta1 ENSMUSG00000031972 MYOGENIN_Q6 0.8 640 4 8
Tnnc1 ENSMUSG00000021909 MYOGENIN_Q6 0.72 720 4 10
Acta1 ENSMUSG00000031972 MYOGENIN_Q6 0.6 480 3 8
B       
Gene Name GeneID TF Name Tot. Score Score #Promos Length
Rgs16 ENSMUSG00000026475 MYOD_01 1 1200 4 12
Rgs16 ENSMUSG00000026475 MYOD_01 0.5 600 2 12
Nptx1 ENSMUSG00000025582 MYOD_01 0.4 840 2 21
Nptx1 ENSMUSG00000025582 MYOD_01 0.4 480 2 12
  1. Conserved TFBS for (A) Myog (matrix MYOGENIN_Q6) and (B) MyoD (matrix MYOD_01) from target genes' promoters in expression data. Total score represents a score of conservation from 0 to 1 over the conserved TFBS length. Score represents an additive score over the binding site. # Promos is the number of promoters with the conserved TFBS. Length is the length of the TFBS.