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Table 2 Data sets and their graph features

From: Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes

Published data set (First Author)

Cluster-graph edgesa

Spoligoforest edges b

Unambiguous edgesc

Soini

445

126

56

David

403

129

60

Jou

366

84

45

Sajduda

342

63

28

Nikolayevskyy

212

59

29

Sola

137

45

22

Easterbrook

90

53

32

Sun

42

20

15

Godreuil

28

22

18

Mokrousov

27

10

6

Millet

22

13

7

Toungoussova

22

11

8

Banu

13

8

6

Douglas

11

6

3

Pfyffer

8

5

4

Pooled edges

  

339

  1. aNumber of single-event deletions in the cluster-graph.
  2. bNumber of single-event deletions in any spoligoforest derived from the data.
  3. cNumber of nodes in the cluster-graph having a single parent node.