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Table 2 The 35 maximal multiple chromosome alignments included in the current release of MOSAIC.

From: MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra-species level

Species

#genomes(1)

Type(2)

#LCB(3)

Backbone coverage(4)

Acinetobacter baumannii

4

MAUVE

33

64,73%

Actinobacillus pleuropneumoniae

3

MAUVE

5

90,65%

Bacillus anthracis

3

MGA

-

88,61%

Bacillus cereus

3

MGA

-

71,58%

Burkholderia cenocepacia K1

3

MAUVE

4

76,92%

Burkholderia cenocepacia K2

3

MAUVE

6

85,66%

Campylobacter jejuni

5

MAUVE

9

78,36%

Chlamydia pneumoniae

4

MAUVE

2

99,64%

Chlamydia trachomatis

4

MAUVE

2

98,57%

Clostridium perfringens

3

MGA

-

77,52%

Corynebacterium glutamicum

3

MAUVE

4

85,11%

Coxiella burnetii

3

MAUVE

20

94,58%

Ehrlichia ruminantium

3

MGA

-

94,68%

Escherichia coli

13

MAUVE

12

68,35%

Francisella tularensis

6

MAUVE

55

83,49%

Haemophilus influenzae

4

MAUVE

19

83,46%

Helicobacter pylori

4

MAUVE

16

80,88%

Lactococcus lactis

3

MAUVE

5

61,59%

Legionella pneumophila

4

MAUVE

8

80,37%

Methanococcus maripaludis

4

MAUVE

6

69,79%

Mycobacterium tuberculosis

3

MAUVE

4

99,02%

Mycoplasma hyopneumoniae

3

MAUVE

3

91,11%

Neisseria meningitides

4

MAUVE

14

78,81%

Pseudomonas aeruginosa

3

MAUVE

6

80,61%

Pseudomonas syringae

3

MAUVE

31

61,39%

Shewanella baltica

3

MAUVE

14

79,29%

Staphylococcus aureus

14

MAUVE

1

83,50%

Streptococcus agalactiae

3

MGA

-

84,65%

Streptococcus pneumoniae

5

MAUVE

3

82,31%

Streptococcus pyogenes

12

MAUVE

5

80,81%

Xanthomonas campestris

4

MAUVE

11

54,60%

Xanthomonas oryzae

3

MAUVE

21

85,82%

Xylella fastidiosa

4

MAUVE

9

84,26%

Yersinia pestis

3

MAUVE

50

96,37%

Yersinia pseudotuberculosis

4

MAUVE

8

89,85%

  1. (1) Number of aligned genomes.
  2. (2) Type of aligner (MGA or MAUVE).
  3. (3) Number of Locally Collinear Blocks for MAUVE alignments.
  4. (4) Mean ratio of backbone length to genome length.