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Table 3 Summary of results on ChIP-chip yeast data.

From: c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression

 

Harbison et al.[20]

c-REDUCE (exact)

c-REDUCE (1 MM/S)

Recovered (44)

44

38

40

Not-recovered (37)

0

18

24

Total (81)

44 (~54%)

53 (~65%)

64 (~79%)

  1. For each transcription factor motif, c-REDUCE results are listed for the complete Harbison et al. [20] data using either exact matches or at most one mismatch or shifted match "1 MM/S" (see Methods).