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Table 1 Imputation Error Rates

From: Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions

 

diploid

triploid

tetraploid

method

I = 1

I = 10

I = 1

I = 10

I = 1

polyHap:

     

z = 8

0.039

0.038

0.056

0.047

0.073

z = 6

0.040

0.045

0.058

0.060

0.087

z = 4

0.049

0.044

0.077

0.065

0.106

z = 2

0.101

0.085

0.144

0.114

0.194

fastPhase:

     

z = 20

0.044

0.043

   

z = 10

0.046

0.045

   

z = 8

0.050

0.046

   
  1. I is the number of repetitions of the EM algorithm.
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BMC Bioinformatics

ISSN: 1471-2105

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