Figure 1
From: Detection of protein catalytic residues at high precision using local network properties
Values of F-measure as a function of threshold on MDev for scores obtained using Equation 1 . Scores were calculated for all residues from the extended test set. The values of the effectiveness measures F1 and F2, as defined in Methods (with β = 1, as triangles, F1, and with β = 2, F2, as circles), were calculated when classifying as catalytic the residues with an MDev value superior to thresholds ranging from 0.2 to 1. The respective thresholds that produced maximal values for respectively F1 and F2, MDev1 and MDev2, are indicated.