Table 3 Gene-centered data sources for Gene Prospector.

Gene-centered

   Entrez Gene

http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene

   Ensembl Human

http://www.ensembl.org/Homo_sapiens/index.html

   Swiss-Prot

http://ca.expasy.org/sprot/

   AceView

http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/index.html?human

   HuGE Navigator

http://www.hugenavigator.net/HuGENavigator/startPagePedia.do

   OMIM

http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim

   GeneCards^®

http://www.genecards.org/index.shtml

   Genetics Home Reference

http://ghr.nlm.nih.gov/BrowseGenes

   SOURCE

http://source.stanford.edu/cgi-bin/source/sourceSearch

   PubMed

http://www.ncbi.nlm.nih.gov/sites/entrez/

Literature

   HuGE Navigator

http://www.hugenavigator.net/HuGENavigator/startPagePubLit.do

   Genetic Association Database

http://geneticassociationdb.nih.gov/

Pharmacogenetics

   PharmGKB

http://www.pharmgkb.org/index.jsp

Variation/Prevalence

   dbSNP

http://www.ncbi.nlm.nih.gov/sites/entrez

   dbSNP-Genotype

http://www.ncbi.nlm.nih.gov/SNP/GeneGt.cgi?

   dbSNP-GeneView

http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=

   ALFRED

http://alfred.med.yale.edu/alfred/index.asp

   SNPper

http://snpper.chip.org/bio/snpper-enter-gene

   Human Gene Mutation Database

http://www.hgmd.cf.ac.uk/ac/index.php

   International HapMap Project

http://snp.cshl.org/index.html

   The Cancer Genome Anatomy Project

http://cgap.nci.nih.gov/

Pathway

   Kyoto Encyclopedia of Genes and Genomes

http://www.genome.jp/kegg/genes.html

   BioCarta

http://www.biocarta.com/genes/index.asp

   Pathway Interaction Database

http://pid.nci.nih.gov/PID/index.shtml

Microarray

   NCBI Gene Expression Omnibus

http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Search&db=geo&term

Miscellaneous

   NCBI Bookshelf

http://www.ncbi.nlm.nih.gov/sites/entrez?db=books

   NCBI Gene Ontology Database

http://www.geneontology.org/

   GeneTests

http://www.geneclinics.org