|
PDB ID
|
1jrh
|
1bj1
|
1g9m
|
1e6j
|
1n8z
|
1iqd
|
1yy9
|
2adf
|
1avz
|
1hx1
|
Average
|
|---|
|
CED ID
|
CE0179
|
CE0175
|
CE0058
|
CE0170
|
CE0096
|
CE0176
|
CE0199
|
CE0154
|
--
|
--
| |
|
Epitope size
|
21
|
19
|
15
|
11
|
20
|
16
|
15
|
15
|
16
|
24
| |
|
Antigen size
|
94
|
93
|
304
|
209
|
580
|
155
|
612
|
188
|
102
|
111
| |
|
Pep-3D-Search
|
|
TP/PE
|
19/40
|
7/13*
|
10/39
|
11/36
|
20/35*
|
6/47
|
10/25
|
12/36
|
10/39
|
13/39
| |
|
MCC
|
0.3902
|
0.1442
|
0.1394
|
0.2285
|
0.1856
|
0.0356
|
0.1030
|
0.2153
|
0.1643
|
0.152
|
0.1758
|
|
Sensitivity
|
0.475
|
0.5833
|
0.2564
|
0.3056
|
0.5714
|
0.1277
|
0.4
|
0.3333
|
0.2564
|
0.3333
|
0.3642
|
|
Precision
|
0.9048
|
0.3684
|
0.6667
|
1.0
|
1.0
|
0.375
|
0.6667
|
0.8
|
0.625
|
0.5417
|
0.6948
|
|
PepSurf
|
|
TP/PE
|
19/28
|
2/17
|
9/31
|
10/30
|
6/11
|
8/31
|
1/8*
|
10/18
|
14/25
|
12/25
| |
|
MCC
|
0.4134
|
-0.0537
|
0.1257
|
0.2056
|
0.0596
|
0.1272
|
0.0067
|
0.1832
|
0.3348
|
0.1863
|
0.1589
|
|
Sensitivity
|
0.6786
|
0.1176
|
0.2903
|
0.3333
|
0.5455
|
0.2581
|
0.125
|
0.5556
|
0.56
|
0.48
|
0.3944
|
|
Precision
|
0.9048
|
0.1053
|
0.6
|
0.9091
|
0.3
|
0.5
|
0.0476
|
0.6667
|
0.875
|
0.5
|
0.5409
|
|
Mapitope
|
|
TP/PE
|
19/22
|
2/18
|
13/33
|
1/6
|
9/13
|
15/106
|
3/23*
|
0/10
|
6/9*
|
5/21
| |
|
MCC
|
0.4224
|
-0.062
|
0.1899
|
0.0154
|
0.0909
|
0.2401
|
0.0209
|
-0.0173
|
0.1387
|
0.0135
|
0.1053
|
|
Sensitivity
|
0.8636
|
0.1111
|
0.3939
|
0.1667
|
0.6923
|
0.1415
|
0.1304
|
0.0
|
0.6667
|
0.2381
|
0.3404
|
|
Precision
|
0.9048
|
0.1053
|
0.8667
|
0.0909
|
0.45
|
0.9375
|
0.1429
|
0.0
|
0.375
|
0.2083
|
0.4081
|
- TP: number of true positives; PE: number of residues in the predicted epitope; TN: number of true negatives; FP: number of false positives; FN: number of false negatives; Matthews correlation coefficient ; ; .
- *For the cases, the best prediction was found in the second-ranked candidate.
