From: Prediction of regulatory elements in mammalian genomes using chromatin signatures
untreated cella | ||||
---|---|---|---|---|
 | Active promoters | Inactive promoters | ||
 | Total Prediction | Expression Supported Prediction | PPV |  |
Heintzman et al. [15]b | 197 | 127 | 64.47% | 31 |
 | 229 | 127 | 55.46% | 32 |
HMM (c1 = 1.95) | 197 | 128 | 64.97% | 25 |
HMM (c1 = 1.6) | 229 | 135 | 58.95% | 31 |
HMM (c1 = 0.5) | 309 | 143 | 46.28% | 40 |
treated cella | ||||
 | Active promoters | Inactive promoters | ||
 | Total Prediction | Expression Supported Prediction | PPV |  |
Heintzman et al. [15] | 204 | 128 | 62.75% | 23 |
 | 213 | 128 | 60.09% | 23 |
HMM (c1 = 1.853) | 204 | 128 | 62.75% | 19 |
HMM (c1 = 1.367) | 247 | 139 | 56.27% | 22 |
HMM (c1 = 0.5) | 328 | 145 | 44.21% | 30 |