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Table 5 Exponentiation algorithm compute times.

From: Pathological rate matrices: from primates to pathogens

Alphabet

Algorithm

Time

Nucleotide

expEIG

0.2

 

expTAYL

0.4

 

expPADÉ

0.2

Dinucleotide

expEIG

0.8

 

expTAYL

0.6

 

expPADÉ

0.4

Trinucleotide

expEIG

11.2

 

expTAYL

7.6

 

expPADÉ

3.7

  1. Mean compute time (milliseconds) from 100 different matrices.
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BMC Bioinformatics

ISSN: 1471-2105

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