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Table 8 Physiochemical characteristics of amino acids

From: Prediction of protein-protein binding site by using core interface residue and support vector machine

Amino Acid Name

Physicochemical characteristics

Amino Acid Name

Physicochemical characteristics

A

(5 0 2)

M

(8 0 2)

C

(6 0 2)

N

(8 0 4)

D

(8 -1 4)

P

(7 0 2)

E

(9 -1 4)

Q

(9 0 4)

F

(11 0 2)

R

(11 1 4)

G

(4 0 2)

S

(6 0 4)

H

(10 0 4)

T

(7 0 4)

I

(8 0 2)

V

(7 0 2)

K

(9 1 2)

W

(14 0 3)

L

(8 0 2)

Y

(12 0 3)

  1. This table shows the physiochemical characteristics value for different amino acid. The first and the third columns are one letter abbreviation of amino acids. The second and the fourth columns are the value of physiochemical characteristics for amino acids. The three numbers in the brackets are the number of atoms, the number of electrostatic charge, and the number of potential hydrogen bond.
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