From: Towards an automatic classification of protein structural domains based on structural similarity
Group# | Tree Cutting Strategy | Hierarchical Cluster Method | VAST Nres | VAST Pcli | SHEBA Nres | SHEBA Zscore | DALI Nres | DALI Zscore | Average | Range |
---|---|---|---|---|---|---|---|---|---|---|
2 | Level | Average | 28 | 24 | 23 | 33 | 28 | 38 | 29 | 15 |
2 | Level | Complete | 28 | 31 | 29 | 40 | 39 | 27 | 32 | 13 |
2 | Level | Single | 14 | 10 | 12 | 21 | 16 | 8 | 13 | 13 |
2 | Level | Ward | 50 | 48 | 48 | 54 | 50 | 49 | 50 | 6 |
3 | Largest Size | Average | 54 | 50 | 48 | 59 | 55 | 41 | 51 | 18 |
3 | Largest Size | Complete | 44 | 44 | 43 | 43 | 50 | 51 | 46 | 8 |
3 | Largest Size | Single | 29 | 22 | 27 | 39 | 34 | 13 | 27 | 26 |
3 | Largest Size | Ward | 61 | 59 | 61 | 58 | 62 | 65 | 61 | 7 |
3 | Tree Completeness | Ward | 57 | 59 | 61 | 56 | 56 | 63 | 58 | 7 |
3 | Highest tree | Ward | 57 | 61 | 62 | 56 | 57 | 63 | 59 | 7 |
1 | Tree skewness | Ward | 25 | 15 | 26 | 22 | 31 | 21 | 23 | 10 |
1 | Longest branch | Ward | 29 | 20 | 26 | 22 | 27 | 13 | 23 | 16 |
2 | Maximum Entropy | Ward | 45 | 40 | 43 | 46 | 58 | 48 | 46 | 18 |
1 | BestTPR | Ward | 12 | 13 | 13 | 10 | 8 | 16 | 12 | 8 |
4 | Best ratio TPR &FPR | Ward | 73 | 72 | 73 | 71 | 75 | 75 | 73 | 4 |
4 | MI | Ward | 73 | 71 | 72 | 71 | 76 | 76 | 73 | 5 |
 | Direct pw§ | none | 50 | 52 | 60 | 61 | 52 | 67 | 57 | 17 |