From: Towards an automatic classification of protein structural domains based on structural similarity
Group | Tree Cutting Strategy | Hierarchical Cluster Method | VAST Nres | VAST Pcli | SHEBA Nres | SHEBA Zscore | DALI Nres | DALI Zscore |
---|---|---|---|---|---|---|---|---|
2 | Level | Average | 460 | 573 | 576 | 402 | 444 | 389 |
2 | Level | Complete | 307 | 250 | 332 | 195 | 221 | 396 |
2 | Level | Single | 810 | 1023 | 921 | 686 | 787 | 1041 |
2 | Level | Ward | 110 | 120 | 138 | 106 | 113 | 121 |
3 | Largest Size | Average | 183 | 210 | 222 | 190 | 169 | 256 |
3 | Largest Size | Complete | 81 | 84 | 88 | 94 | 69 | 82 |
3 | Largest Size | Single | 515 | 658 | 528 | 420 | 439 | 792 |
3 | Largest Size | Ward | 71 | 79 | 81 | 71 | 67 | 72 |
3 | Tree Completeness | Ward | 95 | 89 | 87 | 88 | 101 | 96 |
3 | Highest tree | Ward | 88 | 80 | 84 | 81 | 92 | 91 |
1 | Tree skewness | Ward | 603 | 701 | 603 | 592 | 606 | 641 |
1 | Longest node | Ward | 409 | 704 | 627 | 837 | 646 | 991 |
2 | Maximum Entropy | Ward | 143 | 146 | 109 | 101 | 81 | 109 |
1 | BestTPR | Ward | 1121 | 1112 | 1054 | 1106 | 1185 | 1029 |
4 | Best ratio TPR &FPR | Ward | 59 | 65 | 70 | 61 | 57 | 63 |
4 | MI | Ward | 105 | 76 | 72 | 68 | 55 | 77 |