Table 2 Data set SCL12. The data set SCL12 consists of SCL12L and SCL12T as the learning data set and testing data set, respectively. There are 12 essential GO terms corresponding to subcellular compartments. The number t of (t) in SCL12L represents the number of sequences which are correctly annotated by only one essential GO term.
Label | Compartment | Essential | Number of sequences | |
|---|---|---|---|---|
| Â | Â | GO term | SCL12L | SCL12T |
1 | Centriole | GO:0005814 | 20 (1) | 25 |
2 | Cytoplasm | GO:0005737 | 155 (38) | 377 |
3 | Cytoskeleton | GO:0005856 | 12 (6) | 14 |
4 | Endoplasmic reticulum | GO:0005783 | 28 (19) | 35 |
5 | Extracellular | GO:0030198 | 140 (0) | 301 |
6 | Golgi apparatus | GO:0005794 | 33 (5) | 42 |
7 | Lysosome | GO:0005764 | 32 (27) | 40 |
8 | Microsome | GO:0005792 | 7 (0) | 8 |
9 | Mitochondrion | GO:0005739 | 125 (111) | 228 |
10 | Nucleus | GO:0005634 | 196 (179) | 580 |
11 | Peroxisome | GO:0005777 | 18 (16) | 23 |
12 | Plasma membrane | GO:0005886 | 153 (23) | 368 |
Total | Â | Â | 919 (425) | 1122 |