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Table 2 Tight Cluster Results 1

From: Building pathway clusters from Random Forests classification using class votes

LymphNode (A2ii in Additional file 1) OOB error(%) Number of probes
BC-Pelp1_Modulation_of_Estrogen_Receptor 15.38 20
Alzheimer's_disease 17.13 23
BC-Deregulation_of_CDK5_in_Alzheimers_Disease 16.08 24
BC-Downregulated_of_MTA_3_in_ER_negative_Breast_Tumors 12.24 26
BC-GATA3_participate_in_activating_the_Th2_cytokine 11.89 33
Nitrogen_metabolism 14.34 40
Gene Symbols of informative genes in this pathway cluster   
MAPK3, PELP1, ESR1, PDZK1, HSPB1, CA12, GLS, IL5, JUNB, GATA3, MAP2K3, MAPT, STH, CSNK1A1   
p 53 (A3i in Additional file 1)   
BC-Pelp1_Modulation_of_Estrogen_Receptor 13.94 20
BC-Downregulated_of_MTA_3_in_ER_negative_Breast_Tumors_ 15.54 26
BC-GATA3_participate_in_activating_the_Th2_cytokine 13.55 33
Nitrogen_metabolism 17.13 40
BC-CARM1_and_Regulation_of_the_Estrogen_Receptor 14.34 54
Gene Symbols of informative genes in this pathway cluster   
MAPK3, PELP1, ESR1, PDZK1, HSPB1, HDAC2, CA12, GLS, IL5, JUNB, GATA3, MAP2K3   
  1. The bold pathways are those with low OOB error rates