Table 7 Shortest Path between GATA3 and other Genes in the Top 22 Pathways (without overlap with GATA3 pathway)
From: Building pathway clusters from Random Forests classification using class votes
GATA3 and | Distance (gene steps) | Number of links with the shortest distance* | Genes with literature related to breast cancer* |
|---|---|---|---|
ESR1 (in pathway cluster) | 2 | 6 [MUC1, SMAD8, IKK-alpha, HDAC4, HNF3-alpha, GATA-1] | 7 |
EGFR | 2 | 1 [MUC1] | 6 (subset of the 7 above) |
IKBKB | 2 | 1 [IKK-alpha] | 0 |
IFNAR | 3 | Â | Â |
GFRA1 | 3 | Â | Â |
IGF1 | 3 | Â | Â |
ATP7B | 3 | Â | Â |
VAV3 | 3 | Â | Â |
COX7c | 3 | Â | Â |
B3GNT6 | 3 | Â | Â |
MYCL1 | 3 | Â | Â |
ACACB | 3 | Â | Â |
UQCRH | 3 | Â | Â |
LYN | 3 | Â | Â |
ACTN1 | 3 | Â | Â |
IL6ST | 3 | Â | Â |
STC2 | 4 | Â | Â |
PDXK | 4 | Â | Â |
CFLAR | 4 | Â | Â |
BBOX1 | 4 | Â | Â |
TARS | 5 | Â | Â |
SSH3 | 5 | Â | Â |
NDUFA9 | 6 | Â | Â |
HMGCL | 6 | Â | Â |
ABAT | 6 | Â | Â |
DAZAP2 | Infinity | Â | Â |