From: Microarray data mining using landmark gene-guided clustering
 | Spellman-Gasch (2038 genes) Unique GO terms | Gasch-DeRisi (2474 genes) Unique GO terms | Spellman-DeRisi (1408 genes) Unique GO terms | ||||||
---|---|---|---|---|---|---|---|---|---|
Biological process used to get landmark genes | Spellman | Gasch | Common (p-value) | Gasch | DeRisi | Common (p-value) | Spellman | DeRisi | Common (p-value) |
proteolysis | 28 | 89 | 12 (7.7 × 10-6) | 117 | 80 | 27 (1.2 × 10-7) | 32 | 17 | 3 (3.4 × 10-2) |
electron transport | 28 | 89 | 9 (1.3 × 10-3) | 121 | 125 | 28 (6.5 × 10-4) | 47 | 59 | 15 (1.6 × 10-6) |
regulation of transcription | 23 | 57 | 5 (1.3 × 10-2) | 83 | 76 | 20 (1.6 × 10-6) | 31 | 24 | 5 (2.8 × 10-3) |
protein biosynthesis | 32 | 85 | 7 (2.6 × 10-2) | 101 | 83 | 20 (1.4 × 10-4) | 21 | 53 | 1 (3.2 × 10-1) |
carbohydrate metabolism | 22 | 72 | 7 (1.4 × 10-2) | 97 | 81 | 16 (3.6 × 10-3) | 28 | 33 | 1 (3.6 × 10-1) |
signal transduction | 43 | 68 | 23 (1.0 × 10-15) | 76 | 98 | 22 (1.6 × 10-6) | 44 | 28 | 8 (1.6 × 10-4) |
protein folding | 29 | 72 | 10 (6.3 × 10-5) | 110 | 81 | 31 (4.9 × 10-11) | 24 | 32 | 4 (1.8 × 10-2) |
intracellular protein transport | 38 | 79 | 9 (5.1 × 10-3) | 137 | 83 | 25 (7.6 × 10-5) | 33 | 43 | 7 (2.4 × 10-3) |
lipid metabolism | 43 | 73 | 17 (1.3 × 10-8) | 97 | 85 | 27 (6.4 × 10-9) | 32 | 27 | 4 (2.6 × 10-2) |
ribosome biogenesis | 66 | 94 | 22 (4.4 × 10-7) | 111 | 124 | 22 (1.2 × 10-2) | 55 | 30 | 9 (2.4 × 10-4) |