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Table 2 Common Unique GO Terms between datasets (taken two at a time), using Tight Clustering algorithm.

From: Microarray data mining using landmark gene-guided clustering

 

Spellman-Gasch (2038 genes) Unique GO terms

Gasch-DeRisi (2474 genes) Unique GO terms

Spellman-DeRisi (1408 genes) Unique GO terms

Biological process used to get landmark genes

Spellman

Gasch

Common (p-value)

Gasch

DeRisi

Common (p-value)

Spellman

DeRisi

Common (p-value)

proteolysis

28

89

12 (7.7 × 10-6)

117

80

27 (1.2 × 10-7)

32

17

3 (3.4 × 10-2)

electron transport

28

89

9 (1.3 × 10-3)

121

125

28 (6.5 × 10-4)

47

59

15 (1.6 × 10-6)

regulation of transcription

23

57

5 (1.3 × 10-2)

83

76

20 (1.6 × 10-6)

31

24

5 (2.8 × 10-3)

protein biosynthesis

32

85

7 (2.6 × 10-2)

101

83

20 (1.4 × 10-4)

21

53

1 (3.2 × 10-1)

carbohydrate metabolism

22

72

7 (1.4 × 10-2)

97

81

16 (3.6 × 10-3)

28

33

1 (3.6 × 10-1)

signal transduction

43

68

23 (1.0 × 10-15)

76

98

22 (1.6 × 10-6)

44

28

8 (1.6 × 10-4)

protein folding

29

72

10 (6.3 × 10-5)

110

81

31 (4.9 × 10-11)

24

32

4 (1.8 × 10-2)

intracellular protein transport

38

79

9 (5.1 × 10-3)

137

83

25 (7.6 × 10-5)

33

43

7 (2.4 × 10-3)

lipid metabolism

43

73

17 (1.3 × 10-8)

97

85

27 (6.4 × 10-9)

32

27

4 (2.6 × 10-2)

ribosome biogenesis

66

94

22 (4.4 × 10-7)

111

124

22 (1.2 × 10-2)

55

30

9 (2.4 × 10-4)