Table 1 Time taken for Trichostrongylus vitrinus EST data analysis carried out on 16 CPU Linux cluster (CPU time in seconds).
Category | Number of ESTs | Sequential BLASTX alone (s) | ESTExplorer (s) | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | PHASE I | PHASE II | PHASE III | |||||
| Â | Â | Â | SeqClean | RepeatMasker | CAP3 | BLASTX + BLAST2GO | ESTScan | InterProScan (12 programs) | KOBAS | Total time taken in seconds |
Male | 910 | 981 | 8 | 52 | 48 | 1218 | 4 | 2461 | 1367 | 5158 |
Female | 866 | 729 | 7 | 47 | 45 | 918 | 3 | 1867 | 974 | 3861 |