Table 3 RMSD values for larger proteins. For each of the proteins in the larger set, the RMSD of the best model in the top four ranked fold-types is tabulated (along with the fold-type in parentheses). Where this corresponds to the native fold, the value is in bold type.
From: Functional site prediction selects correct protein models
PDB (length) | Rank-1 | Rank-2 | Rank-3 | Rank-4 |
|---|---|---|---|---|
1v9w (130) | 13.4 (F23) | 11.3 (F24) | 6.9 (F26) | 6.3 (F25) |
1rlj (135) | 13.7 (F10) | 4.9 (F9) | 11.2 (F1) | 13.7 (F8) |
1kjnA (159) | 3.4 (F1) | 5.0 (F3) | 5.0 (F4) | 9.4 (F6) |
1vq1A (178) | 8.5 (F12) | 9.5 (F3) | 7.1 (F5) | 7.9 (F1) |
1uxoA (186) | 13.7 (F2) | 11.4 (F14) | 8.9 (F6) | 11.8 (F11) |
1t57A (186) | 14.8 (F8) | 9.8 (F10) | 14.9 (F1) | 9.9 (F3) |
1vk2A (187) | 16.4 (F13) | 14.7 (F4) | 14.5 (F2) | 15.9 (F10) |