Table 5 Results (%) of TI on the TE dataset. All figures, except 'Avg. Rank', are percentages. There are four entity types in the TE data, i.e., protein, gene, mRNAcDNA and GOMOP. The evaluation was carried out on all entity types.
From: Distinguishing the species of biomedical named entities for term identification
Method | Prec@1 | Prec@5 | Prec@10 | Prec@15 | Prec@20 | Avg. Rank |
|---|---|---|---|---|---|---|
Baseline | 63.24 | 76.20 | 77.30 | 77.94 | 78.25 | 1.72 |
Gold Species | 71.82 | 78.03 | 78.34 | 78.40 | 78.41 | 1.29 |
Rule | 63.45 | 76.21 | 77.30 | 77.95 | 78.25 | 1.72 |
ML(mouse) | 58.76 | 75.40 | 77.25 | 77.92 | 78.24 | 1.90 |
ML(EPPI) | 66.59 | 76.53 | 77.23 | 77.76 | 78.12 | 1.68 |
ML(EPPI)+Rule | 66.85 | 76.54 | 77.24 | 77.76 | 78.12 | 1.67 |
ML(TE) | 66.12 | 76.25 | 77.32 | 77.81 | 78.11 | 1.70 |
ML(TE)+Rule | 66.37 | 76.25 | 77.32 | 77.81 | 78.11 | 1.70 |
ML(EPPI+TE) | 65.78 | 76.14 | 77.28 | 77.84 | 78.12 | 1.71 |
ML(EPPI+TE)+Rule | 66.03 | 76.14 | 77.29 | 77.84 | 78.12 | 1.70 |