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Table 2 Average prediction quality of the group-specific profiles. Performance of group-specific profile models at E-value threshold of 10-9.

From: The value of position-specific scoring matrices for assessment of protein allegenicity

Profile ACC (%) SP (%) SE (%) PPV (%) NPV (%) MCC
Animal 86.01 87.55 65.39 27.09 97.26 0.36
Food 69.63 63.89 83.22 48.85 90.37 0.43
Weed 77.79 78.44 69.33 18.70 97.26 0.27
Insect 87.20 87.82 82.08 44.05 97.71 0.54
Mite 95.29 95.80 90.81 68.48 99.02 0.76
Grass 87.81 87.91 87.16 49.27 98.25 0.59
Tree 82.10 81.56 86.88 35.85 98.14 0.48
Fungi 80.50 80.82 78.17 35.77 96.51 0.44
Other 82.50 83.62 61.13 17.29 97.55 0.26