Table 2 Average prediction quality of the group-specific profiles. Performance of group-specific profile models at E-value threshold of 10-9.
From: The value of position-specific scoring matrices for assessment of protein allegenicity
Profile | ACC (%) | SP (%) | SE (%) | PPV (%) | NPV (%) | MCC |
|---|---|---|---|---|---|---|
Animal | 86.01 | 87.55 | 65.39 | 27.09 | 97.26 | 0.36 |
Food | 69.63 | 63.89 | 83.22 | 48.85 | 90.37 | 0.43 |
Weed | 77.79 | 78.44 | 69.33 | 18.70 | 97.26 | 0.27 |
Insect | 87.20 | 87.82 | 82.08 | 44.05 | 97.71 | 0.54 |
Mite | 95.29 | 95.80 | 90.81 | 68.48 | 99.02 | 0.76 |
Grass | 87.81 | 87.91 | 87.16 | 49.27 | 98.25 | 0.59 |
Tree | 82.10 | 81.56 | 86.88 | 35.85 | 98.14 | 0.48 |
Fungi | 80.50 | 80.82 | 78.17 | 35.77 | 96.51 | 0.44 |
Other | 82.50 | 83.62 | 61.13 | 17.29 | 97.55 | 0.26 |