Table 1 Summary of three benchmark data sets
From: Predicting RNA-binding sites of proteins using support vector machines and evolutionary information
Data set | RBP86 | RBP109 | RBP107 |
|---|---|---|---|
Number of protein chains | 86 | 109 | 107 |
X-ray crystallography resolution | >3 Ã… | >3.5 Ã… | >3.5 Ã… |
Sequence identity | ≤70% | ≤30% | ≤25% |
Number of interacting residues | 4,568 | 3,581 | 2,555 |
Number of non-interacting residues | 15,503 | 21,526 | 19,496 |
Non-interacting/interacting residues | 3.39 | 6.01 | 7.63 |
Total number of residues | 20,071 | 25,107 | 22,051 |