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Table 2 Comparison of the different features between VarDetect, PolyPhred, Genalys, novoSNP and Mutation Surveyor

From: VarDetect: a nucleotide sequence variation exploratory tool

List of different features VarDetect PolyPhred Genalys novoSNP Mutation Surveyor
Operating Systems* All All Windows, Mac Windows, Linux Windows
Easy installation Yes No Yes Yes Yes
Graphical User Interface (GUI) Yes w/Consed Yes Yes Yes
Command line interface (CLI) Yes Yes No No No
Allele frequency calculation for Yes No Yes No No
two-pooled DNA samples      
  1. (*VarDetect requires Java runtime (JRE) version 1.4 or later)