Table 2 Accuracy of data sets generated along a 12 taxa tree (HKY model).
12 taxa tree - HKY model | ||||||
|---|---|---|---|---|---|---|
% editing | 0 | 1 | 3 | 5 | 7 | 10 |
200 nucleotides | Â | Â | Â | Â | Â | Â |
Genomic | 1 | 0.92 | 0.92 | 0.84 | 0.82* | 0.80* |
cDNA | 1 | 0.89 | 0.85 | 0.80 | 0.74 | 0.72 |
Control | 1 | 0.90 | 0.91 | 0.83 | 0.80 | 0.79 |
300 nucleotides | Â | Â | Â | Â | Â | Â |
Genomic | 1 | 0.96 | 0.95 | 0.94 | 0.92* | 0.90* |
cDNA | 1 | 0.93 | 0.93 | 0.91 | 0.83 | 0.77 |
Control | 1 | 0.96 | 0.95 | 0.94 | 0.92 | 0.90 |
500 nucleotides | Â | Â | Â | Â | Â | Â |
Genomic | 1 | 0.98 | 0.98 | 0.98 | 0.97 | 0.97 |
cDNA | 1 | 0.98 | 0.98 | 0.96 | 0.95 | 0.92 |
Control | 1 | 0.98 | 0.98 | 0.98 | 0.97 | 0.96 |
800 nucleotides | Â | Â | Â | Â | Â | Â |
Genomic | 1 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
cDNA | 1 | 0.99 | 0.99 | 0.99 | 0.98 | 0.97 |
Control | 1 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
1,000 nucleotides | Â | Â | Â | Â | Â | Â |
Genomic | 1 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
cDNA | 1 | 0.99 | 0.99 | 0.99 | 0.98 | 0.98 |
Control | 1 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |