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Table 2 Recognition of disease in sentences.

From: Assessment of disease named entity recognition on a corpus of annotated sentences

 

Benchmark

Diseases

Annotated

Diseases

FP

TP

Recall

Precision

F-measure

D look-up

924

280

699

226

144

555

60.06

79.40

68.39

Statistical

924

280

937

309

317

620

67.10

66.17

66.63

MetaMap

924

280

590

192

95

495

53.57

83.90

65.39

Vote 1

924

280

1164

358

298

866

93.72

74.40

82.95

Vote 2

924

280

696

228

124

572

61.90

82.18

70.62

Vote 3

924

280

388

137

30

358

38.74

92.27

54.57

This table shows the total number of diseases in the benchmark (Benchmark), the number of distinct diseases (Diseases), the number of diseases annotated by the method and the number of unique diseases identified. Then we present the result on standard measures like precision and recall.