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Figure 7 | BMC Bioinformatics

Figure 7

From: The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

Figure 7

Inter-site reproducibility of log2 FC and log2 t-statistic. a: log2 FC of site 1 versus log2 FC of site 2; b: log2 t-statistic of test site 1 versus log2 t-statistic of test site 2; and c: log2 FC of test site 1 versus log2 t-statistic of test site 1. Shown here are results for comparing sample B and sample A for all "12,091" genes commonly probed by the five microarray platforms. The inter-site reproducibility of log2 FC (a) is much higher than that of log2 t-statistic (b). The relationship between log2 FC and log2 t-statistic from the same test site is non-linear and the correlation appears to be low (c).

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BMC Bioinformatics

ISSN: 1471-2105

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