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Table 2 Identifying directional relationships in MEDLINE for the gene c-myc.

From: Large-scale directional relationship extraction and resolution

ObjectName No rel. ND Rel. F+ F- Fn R+ R- Rn Expected Extracted
Process           
Anaplasia 6 1 0 0 1 1 0 4 F+/R+ None
Angiogenesis 11 10 1 2 7 1 1 3 F+ F -
Breast cancer 92 12 2 0 44 9 2 40 F+ R+
Cell growth 131 34 19 19 76 6 8 34 F+ Inc.
Cervical carcinoma 22 4 0 0 3 0 0 8 F+ None
DNA Damage 33 7 1 0 14 3 2 11 F+ R+
DNA repair 13 11 0 0 1 1 0 4 F- None
Medulloblastoma 21 6 4 0 13 1 0 20 F+ F+
Tumorigenesis 80 40 20 6 48 6 4 32 F+ F+
Chemical           
Rapamycin 4 0 1 0 2 0 1 0 R+ None
Reactive oxygen species 9 5 2 0 4 1 1 10 F+ F+
Valproic acid 1 0 0 0 0 0 2 0 R- R-
Gene           
AICDA 4 0 0 0 0 0 0 1 R+ None
AURKA 5 1 0 0 2 0 0 1 R+ None
Calcineurin 0 0 0 1 0 0 0 0 R+ None
CDKN2A 95 37 5 2 26 1 7 42 F - R -
CREBBP 7 3 0 0 5 1 0 6 R- None
EPHA2 8 0 1 0 1 0 0 2 F- None
FBXW7 18 5 0 0 4 4 1 17 R - R+
HDAC1 1 5 0 0 0 0 0 4 F+ None
HMGCS2 1 0 0 1 0 0 0 1 F- None
IFN-gamma 2 1 1 0 0 0 1 1 R- None
JUN 558 28 12 0 71 12 6 75 F - F+/R+
NDRG2 2 1 0 0 5 0 0 2 F- None
NFATC1 1 0 0 0 1 2 0 1 R+ R+
PCGF2 4 4 0 0 0 0 0 2 R- None
PPARG 1 1 0 0 1 0 0 2 F+ None
PRL 15 0 0 0 5 6 1 5 R+ R+
RAC1 5 3 2 1 1 0 0 2 R+ F+
SP1 29 5 0 3 9 4 0 9 R+ R+
STAT5A 6 2 1 0 0 2 0 4 R - R+
Telomerase 27 5 13 0 9 5 1 8 F+ F+
VEGFA 49 2 0 1 18 0 0 17 F+ None
WRN 1 1 2 0 3 0 0 2 F+ F+
ZBTB16 3 2 0 0 0 0 0 1 R- None
ZBTB17 24 17 1 8 11 1 3 9 F- F-
Zfp472 1 2 0 0 0 0 0 1 R- None
  1. See Table 1 for header explanations. ("Inc." = inconclusive - tied for the highest relation score).
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