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Table 6 Percent similarity for NSP generated contigs aligned with actual FtsH genes

From: Validation of an NSP-based (negative selection pattern) gene family identification strategy

  GeneA GeneB
  contig1 contig5 contig3 contig6
AtFtsH1 NSS 71 73 NSS
AtFtsH2 100 97 86 83
AtFtsH3 NSS 78 70 NSS
AtFtsH4 NSS 79 78 NSS
AtFtsH5 NSS 73 73 NSS
AtFtsH6 72 73 69 77
AtFtsH7 NSS 68 73 NSS
AtFtsH8 88 85 99 100
AtFtsH9 NSS 68 NSS NSS
AtFtsH10 NSS 75 74 NSS
AtFtsH11 NSS 77 77 NSS
AtFtsH12 NSS NSS NSS NSS
  1. Representative contigs for 2 putative gene family members, GeneA and GeneB, identified by the NSP method were aligned with actual Arabidopsis gene family members and percent similarity determined.