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Table 3 Comparison of ASIDB ranking with pearson correlation for CESA homologs. The ranking of genes depicting relationship between CESA subgroup derived from the score with the pearson correlation in parenthesis.

From: Novel implementation of conditional co-regulation by graph theory to derive co-expressed genes from microarray data

RANK CESA1 CESA2 CESA3 CESA5 CESA6 CESA4 CESA7 CESA8
CESA1 - 53 (.4319) 1 (.8554) 25 (.4822) 2 (.7231) 155 (.3368) 152 (.2495) 439 (.3224)
CESA3 2 (.8554) 9 (.5283) - 7 (.5252) 5 (.7179) 312 (.1678) 219 (.1093) 350 (.1853)
CESA6 3 (.7231) 14 (.5684) 17 (.7179) 1 (.6678) - 240 (.1605) 125 (-.0458) 365 (-.033)
CESA4 165 (.3368) 453 (-.2676) 368 (.1678) 287 (.022) 231 (.1605) - 1 (.6776) 8 (.5777)
CESA7 118 (.2495) 376 (-.4548) 242 (.1093) 282 (-.0267) 73 1 (.6776) - 2 (.7249)
CESA8 448 (.3224) 193 (-.186) 397 (.1853) 382 (.046) 323 (-.033) 4 (.5777) 1 (.7249) -
  1. *NA is genes omitted in the CSB.DB (atge0200 matrix)
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BMC Bioinformatics

ISSN: 1471-2105

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