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Table 1 Structural and sequence closeness among pairs of haemagglutinin proteins with solved structures

From: Comparative structural analysis of haemagglutinin proteins from type A influenza viruses: conserved and variable features

 

RBD

H2

H5

H9

H3

H7

H1

r:1.343

r:0.918

r:1.249

r:2.292

r:2.784

i:55.4 s:78.4

i:52.0 s:78.3

i:45.7 s:69.7

i:38.0 s:61.1

i:37.2 s:63.7

H2

 

r:1.130

r:1.636

r:2.083

r:1.772

i:65.6 s:83.7

i:41.4 s:66.8

i:36.8 s:57.3

i:33.5 s:60.7

H5

 

r:1.498

r:2.241

r:3.085

i:41.4 s:66.4

i:37.3 s:61.4

i:38.4 s:67.4

H9

 

r:1.983

r:2.069

i:36.9 s:60.4

i:33.9 s:58.4

H3

 

r:1.429

i:35.0 s:63.6

 

HA1

H2

H5

H9

H3

H7

H1

r:1.476

r:1.065

r:1.563

r:2.548

r:2.941

i:56.7 s:78.7

i:56.6 s:79.2

i:46.4 s:69.4

i:37.1 s:62.9

i:36.1 s:63.3

H2

 

r:1.527

r:2.087

r:3.253

r:3.025

i:67.7 s:83.3

i:43.5 s:65.3

i:35.3 s:58.3

i:34.5 s:60.6

H5

 

r:1.680

r:3.043

r:2.755

i:43.5 s:67.0

i:37.2 s:61.9

i:36.9 s:66.7

H9

 

r:2.320

r:3.672

i:35.8 s:60.9

i:33.5 s:59.8

H3

 

r:1.631

i:37.8 s:64.0

 

Monomer

H2

H5

H9

H3

H7

H1

r:1.180

r:0.98

r:1.350

r:1.710

r:1.780

i:64.2 s:82.9

i:62.8 s:81.5

i:50.4 s:71.3

i:40.0 s:61.6

i:42.4 s:67.1

H2

 

r:1.100

r:1.450

r:1.760

r:1.730

i:73.0 s:85.7

i:49.0 s:69.6

i:37.6 s:59.6

i:40.6 s:66.5

H5

 

r:1.686

r:1.680

r:1.620

i:48.7 s:72.0

i:40.2 s:63.9

i:42.3 s:69.9

H9

 

r:1.760

r:1.850

i:37.9 s:61.7

i:40.8 s:66.1

H3

 

r:1.250

i:44.0 s:66.2

  1. Within each cell, the upper value is RMSD (r) for the superposed pair and lower values (in %) are identity (i) and similarity (s) for corresponding, aligned amino acid sequences.