Table 5 Parameter settings in base epitope predictors
From: A meta-learning approach for B-cell conformational epitope prediction
Base learner | Parameter | Range of parameter values | Selected value |
|---|---|---|---|
SEPPA 2.0 | scoring threshold | 0.00 ~ 1.00 | 0.21 |
DiscoTope 2.0 | scoring threshold | -70.00 ~ 10.00 | -18.09 |
Bpredictor | scoring threshold | 0.00 ~ 1.00 | 0.88 |
ElliPro | scoring threshold | 0.00 ~ 1.00 | 0.44 |
AAP | window size | 10, 12, 14, 16, 18, 20 | 16 |
ABCpred | scoring threshold | 0.00 ~ 1.00 | 0.84 |
BCPREDS | window size | 12, 14, 16, 18, 20, 22 | 20 |
BepiPred | scoring threshold | -4.00 ~ 3.00 | 0.02 |