From: Linear-time computation of minimal absent words using suffix array
Species | Abbreviation | Genome reference |
---|---|---|
Bacteria | ||
Bacillus anthracis strain Ames | Ba | NC003997 |
Bacillus subtilis strain 168 | Bs | NC000964 |
Escherichia coli strain K-12 substrain MG1655 | Ec | NC000913 |
Haemophilus influenzae strain Rd KW20 | Hi | NC000907 |
Helicobacter pylori strain 26695 | Hp | NC000915 |
Lactobacillus casei strain BL23 | Lc | NC010999 |
Lactococcus lactis strain Il1403 | Ll | NC002662 |
Mycoplasma genitalium strain G37 | Mg | NC000908 |
Staphylococcus aureus strain N315 | Sa | NC002745 |
Streptococcus pneumoniae strain CGSP14 | Sp | NC010582 |
Xanthomonas campestris strain 8004 | Xc | NC007086 |
Eukaryotes | ||
Arabidopsis thaliana (thale cress) | At | AGI release 7.2 |
Drosophila melanogaster (fruit fly) | Dm | FlyBase release 5 |
Homo sapiens (human) | Hs | build 38 |
Mus musculus (mouse) | Mm | build 38 |