Table 5 Elapsed-time comparison of MAW and PFG for computing all minimal absent words in synthetic data
From: Linear-time computation of minimal absent words using suffix array
Sequence | Size (bp) | MAW (s) | PFG (s) |
|---|---|---|---|
S1 | 248,956,422 | 435.63 | 746.93 |
S2 | 248,956,422 | 438.52 | 733.69 |
S3 | 248,956,422 | 444.62 | 726.34 |
S4 | 248,956,422 | 444.06 | 743.29 |
S5 | 248,956,422 | 449.25 | 741.01 |