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Table 4 Mean normalised classification rates over 4 multi-phenotype datasets according to performance

From: Pathway activity inference for multiclass disease classification through a mathematical programming optimisation framework

Multiclass

DIGS

SG

Mean [ [28]]

Median [ [28]]

Per_pathway [ [72]]

PCA [ [45]]

5-NN

1

0.9532

0.8126

0.8090

0.8158

0.8696

NN

1

0.9488

0.9402

0.9334

0.8322

0.9585

SMO

1

0.9335

0.9372

0.9246

0.8521

0.9452

HB

1

0.9241

0.7518

0.7639

0.7893

0.8043

Logistic

1

0.8290

0.5614

0.5440

0.5589

0.6450

Mean

1

0.91772

0.80064

0.79498

0.76966

0.84452

  1. The highest classification rate achieved across all competing methods is highlighted as bold for each classifier.
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BMC Bioinformatics

ISSN: 1471-2105

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