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Table 2 Deleted reactions for succinic acid production with E. Coli, using the iJR904 metabolic model

From: An integrated network visualization framework towards metabolic engineering applications

Reaction Model ID Stoichiometric equation
Serine hydroxymethyltransferase R_GHMT2 L-serine + tetrahydrofolate < = > glycine + 5,10-methylenetetrahydrofolate + H2O
Pyridine nucleotide transhydrogenase R_THD2 H+e + NADH + NADP+ = > H+c + NAD+ + NADPH
Succinate dehydrogenase R_SUCD1i FAD+ + Succinate = > FADH2 + Fumarate
Transkelotase I R_TKT1 D-erythrose-4-phosphate + D-xylulose-5-phosphate < = > D-fructose-6-phosphate + D-glyceraldehyde-3-phosphate