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Table 4 Classification results based on different feature subsets using three methods

From: Prediction of plant pre-microRNAs and their microRNAs in genome-scale sequences using structure-sequence features and support vector machine

Model

ML method

Feature subset selection method

Feature number

Classification results (%)

SE

SP

Acc

Gm

miPlantPre

NBC

PCA

76

92.2

92.6

92.4

92.4

CFS

20

93.9

97.8

95.8

95.8

B-SVM-RFE

47

93.8

98.6

96.2

96.2

All features

152

92.9

98.0

95.4

95.4

RF

PCA

76

93.5

95.3

94.4

94.4

CFS

20

95.0

97.6

96.3

96.3

B-SVM-RFE

47

95.3

97.7

96.5

96.5

All features

152

95.3

97.7

96.5

96.5

SVM

PCA

76

94.9

99.2

97.0

97.0

CFS

20

94.3

99.1

96.7

96.7

B-SVM-RFE

47

95.5

99.1

97.2

97.2

All features

152

93.9

98.5

96.2

96.2

miPlantMat

NBC

PCA

71

88.6

82.3

85.5

85.4

CFS

40

93.2

74.8

83.6

83.5

B-SVM-RFE

63

89.8

88.4

89.1

89.1

All features

152

91.7

79.3

85.5

85.3

RF

PCA

71

93.2

73.2

83.2

82.6

CFS

40

89.2

89.1

89.2

89.2

B-SVM-RFE

63

89.7

88.6

89.2

89.2

All features

152

86.6

84.4

85.5

85.5

SVM

PCA

71

88.6

84.3

86.4

86.4

CFS

40

90.6

87.5

89.1

89.1

B-SVM-RFE

63

92.9

88.7

90.8

90.8

All features

152

87.1

81.6

84.4

84.4