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Table 1 Group-specific CNV patterns detected by SubPatCNV on TCGA ovarian cancer data

From: SubPatCNV: approximate subspace pattern mining for mapping copy-number variations

Chromosome BP Start BP Stop p _value Gene Type
2 203,309,381 203,309,495 9.9e-05 BMPR2 amp
5 18,404,830 18,405,744 5.7e-06   amp
7 153,041,965 153,042,465 6.6e-06   amp
4 96,394,794 96,395,108 9.1e-05 UNC5C del
4 104,496,565 104,496,585 4.6e-05   del
4 123,047,859 123,049,424 1.1e-05   del
4 10,278,3351 102,787,549 9.1e-05 BANK1 del
13 29,955,805 29,955,844 7.9e-05 MTUS2 del
13 37,798,703 37,799,335 7.4e-05   del
13 50,741,528 50,741,888 3.7e-05 DLEU1 del
13 51,515,940 51,516,056 7.9e-05 RNASEH2B del
13 110,545,737 110,546,191 7.9e-05   del
21 17,086,255 17,086,366 5.5e-05   del
21 24,418,912 24,419,862 9.1e-05   del