Table 1 PDB IDs, chains, conformational state and ligands bound of the Adenylate Kinase analysed using comparative analysis in case study 2
From: WEBnm@ v2.0: Web server and services for comparing protein flexibility
PDB ID | Chain | State | Organism | Ligands |
|---|---|---|---|---|
2ak3 | A | NMP-binding domain closed | Bos taurus | AMP |
4ake | A | Both NMP-binding and LID domains open | E. coli | None |
1ak2 | A | LID domain nearly closed | Bos taurus | None |
1dvr | B | LID domain closed | S. cerevisiae | ATP |
1ake | A | Both NMP-binding and LID domains closed | E. coli | AP5 |
2eck | A | Both NMP-binding and LID domains closed | E. coli | AMP and ADP |
1aky | A | Both NMP-binding and LID domains closed | S. cerevisiae | AP5 and imidazole |
2aky | A | Both NMP-binding and LID domains closed | S. cerevisiae | AP5 and Mg2+ |