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Table 2 Algorithm comparison using a subset of samples with four controls

From: Quantitative analysis of differences in copy numbers using read depth obtained from PCR-enriched samples and controls

Algorithm

TP

TN

FP

FN

Total

TPR

TNR

quandico

41

491

18

1

551

0.976

0.965

ONCOCNV

35

503

10

9

557

0.795

0.981