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Table 3 Results for dataset A-C 10

From: ERD: a fast and reliable tool for RNA design including constraints

 

INFO-RNA

MODENA

NUPACK

RNAiFold

ERD

Index

SC

E T

SC

E T

SC

E T

SC

SC

E T

A1

38

0.15

47

33.09

50

12.56

50

50

0.17

A2

50

0.03

39

35.85

50

4.38

50

50

0.08

A3

32

1.08

40

49.05

46

76.88

50

50

0.82

A4

50

0.33

16

114.78

50

172.61

50

50

0.93

A5

4

1558.55

42

283.96

35

1740.54

50

50

172.74

A6

4

2612.28

14

287.76

20

3704.05

0

50

34.30

A7

0

∞

22

335.26

0

∞

50

50

175.35

A8

19

536.49

0

∞

0

∞

0

25

1097.67

  1. The success count (SC) and expected time (E T ) comparison between the existing approaches for dataset A-C10, including 10% of sequence constraints. The ∞ represents no result and the bold faces indicate the best results.
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BMC Bioinformatics

ISSN: 1471-2105

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