Skip to main content

Table 9 Results for dataset C

From: ERD: a fast and reliable tool for RNA design including constraints

Approach

E T

SC

E ED

E SN

INFO-RNA

43.79

32

54.86

28.69

MODENA

165.86

395

27.05

35.73

NUPACK

483.41

336

20.21

38.91

RNAifold

1888.32

272

29.09

31.12

ERD

6.11

401

13.22

39.44

ERD-EC

217.99

386

7.94

39.88

  1. The comparison of expected time (E T ), success count (SC), expected energy distance (E ED ), and expected similarity to the natural sequences (E SN ) between the existing approaches for dataset C. ERD-EC is related to the ERD when the energy constraint is specified. The SC indicates how many sequences are successfully designed. The best results are indicated in bold face.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us